[Stellenangebote] Teilzeit-Job: Stud. Hilfskraft (40h/m), Genome Analysis Project, Berlin Center for Genomics in Biodiversity Reseach/Bundesanstalt für Materialforschung und Materialprüfung, Berlin

Marcus Edel marcusedel at zedat.fu-berlin.de
Mi Aug 2 15:13:03 CEST 2017

Hi all,

the Berlin Center for Genomics in Biodiversity Reseach (BeGenDiv)  and
the Bundesanstalt für Materialforschung und Materialprüfung are looking
for a master student interested in working on a genome analysis project.
We are offering a six months student assistant position (Studentische
Hilfskraft) for 40 hours per month and the possibility to continue the
project as a master thesis.

Please find attached the official job announcement with details on how
to apply.

Here are some more details on the project:
Melanised microcolonial fungi (MCF) are a group of fungi that are
extremely resistant to environmental stresses including radiation,
desiccation and extreme heat. As a result they are able to colonize
surfaces that are exposed to these conditions like rocks, cliffs,
building facades and solar panels. In combination with other microbes
they from a biofilm in these surfaces and cause characteristic coloring
and weathering.

Knufia petricola is a suitable model organism from this family and has
been cultivated and studied. In this project its full genome will be
assembled and annotated. Sequencing is finished and a preliminary
assembly and annotation has been conducted.
The following data is available:
- 2x coverage with 454 reads
- 300x coverage with Illumina paired-end reads
- 30x coverage with PacBio long reads
- Illumina RNA-Seq reads for gene annotation

Kind Regards,
Felix Heeger

Leibniz-Institute of Freshwater Ecology and Inland Fisheries (IGB)

Berlin Center for Genomics in Biodiversity Research (BeGenDiv)
Königin-Luise-Str. 6-8
14195 - Berlin

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